AustralieFrV1, Main, Exploration, bibRecord, 007620

Prevalence and genetic diversity of adeno-associated viruses in bats from China

Identifieur interne : 007620 ( Main/Exploration ); précédent : 007619; suivant : 007621

Prevalence and genetic diversity of adeno-associated viruses in bats from China

Auteurs : YAN LI [République populaire de Chine] ; XINGYI GE [République populaire de Chine] ; Chung-Chau Hon [France] ; HUAJUN ZHANG [République populaire de Chine] ; PENG ZHOU [République populaire de Chine] ; YUNZHI ZHANG [République populaire de Chine] ; YI WU [Australie] ; Lin-Fa Wang [Australie] ; ZHENGLI SHI [République populaire de Chine]

Source :

Journal of general virology [ 0022-1317 ] ; 2010.

RBID : Pascal:10-0477251

Descripteurs français

Pascal (Inist)
- Prévalence, Epidémiologie, Diversité génétique.

English descriptors

KwdEn :
- Epidemiology, Genetic diversity, Prevalence.

Abstract

Bats are increasingly being recognized as important natural reservoirs of different viruses. Adeno-associated viruses (AAVs) are widely distributed in primates and their distribution in bats is unknown. In this study, a total of 370 faecal swab samples from 19 bat species were collected from various provinces of China and examined for the presence of AAVs. The mean prevalence rate was 22.4 % (83 positives out of 370 samples), ranging from 10 to 38.9 % among different bat species. The genome sequence spanning the entire rep-cap ORFs was determined from one chosen AAV-positive sample (designated BtAAV-YNM). Phylogenetic analysis of the entire rep-cap ORF coding sequences suggested that BtAAV-YNM is relatively distant to known primate AAVs, but phylogenetically closer to porcine AAV strain Po3. Further analysis of the partial cap ORF sequences of bat AAV samples (n=49) revealed a remarkably large genetic diversity, with an average pairwise nucleotide identity of only 84.3 %. Co-presence of multiple distinctive genotypes of bat AAV within an individual sample was also observed. These results demonstrated that diverse AAVs might be widely distributed in bat populations.

Affiliations:

Australie, France, République populaire de Chine

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Le document en format XML

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<front><div type="abstract" xml:lang="en">Bats are increasingly being recognized as important natural reservoirs of different viruses. Adeno-associated viruses (AAVs) are widely distributed in primates and their distribution in bats is unknown. In this study, a total of 370 faecal swab samples from 19 bat species were collected from various provinces of China and examined for the presence of AAVs. The mean prevalence rate was 22.4 % (83 positives out of 370 samples), ranging from 10 to 38.9 % among different bat species. The genome sequence spanning the entire rep-cap ORFs was determined from one chosen AAV-positive sample (designated BtAAV-YNM). Phylogenetic analysis of the entire rep-cap ORF coding sequences suggested that BtAAV-YNM is relatively distant to known primate AAVs, but phylogenetically closer to porcine AAV strain Po3. Further analysis of the partial cap ORF sequences of bat AAV samples (n=49) revealed a remarkably large genetic diversity, with an average pairwise nucleotide identity of only 84.3 %. Co-presence of multiple distinctive genotypes of bat AAV within an individual sample was also observed. These results demonstrated that diverse AAVs might be widely distributed in bat populations.</div>
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Prevalence and genetic diversity of adeno-associated viruses in bats from China

Prevalence and genetic diversity of adeno-associated viruses in bats from China

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri